E.T.E.

E.T.E.

A python Environment for phylogenetic Tree Exploration
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ETE real examples

  • Load NCBI taxonomy tree (includes script)
    Load NCBI taxonomy tree (includes script)
  • Nice tree reconciliation viewer
    Nice tree reconciliation viewer
  • Per node analysis of the fungal Tree of Life
    Per node analysis of the fungal Tree of Life
  • Selective pressures per site and per branch
    Selective pressures per site and per branch
  • semi-circular bubble tree map
    semi-circular bubble tree map
  • Site analysis of selective pressure with SLR and Codeml
    Site analysis of selective pressure with SLR and Codeml
  • Tree showing genomic information
    Tree showing genomic information
  • Visual clustering validation using Silhouette index
    Visual clustering validation using Silhouette index
ETE is currently developed at the Comparative Genomics group at CRG